1TA4 Oxidoreductase date May 19, 2004
title Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase Fr Haemophilus Influenzae With A Bound Arsenate
authors R.E.Viola
compound source
Molecule: Aspartate-Semialdehyde Dehydrogenase
Chain: A
Synonym: Asa Dehydrogenase, Asadh
Ec: 1.2.1.11
Engineered: Yes
Organism_scientific: Haemophilus Influenzae
Organism_taxid: 727
Gene: Asd, Hi0646
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.225 R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.769 54.843 57.487 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.28 Å
ligand ART enzyme Oxidoreductase E.C.1.2.1.11 BRENDA
related structures by homologous chain: 1PS8, 1TB4
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for discrimination between oxyanion substrates or inhibitors in aspartate-beta-semialdehyde dehydrogenase., Faehnle CR, Blanco J, Viola RE, Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 2):2320-4. Epub, 2004 Nov 26. PMID:15583380
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1ta4.pdb1.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 1TA4
  • CSU: Contacts of Structural Units for 1TA4
  • Likely Quarternary Molecular Structure file(s) for 1TA4
  • Structure Factors (341 Kb)
  • Retrieve 1TA4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TA4 from S2C, [Save to disk]
  • Re-refined 1ta4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TA4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TA4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TA4, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ta4a1, region A:1-133,A:358-368 [Jmol] [rasmolscript] [script source]
        - Domain d1ta4a2, region A:134-357 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ta4_A] [1ta4]
  • SWISS-PROT database: [P44801]
  • Domain organization of [DHAS_HAEIN] by SWISSPFAM
  • Domain found in 1TA4: [Semialdhyde_dh ] by SMART
  • Other resources with information on 1TA4
  • Community annotation for 1TA4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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