1TEX Transferase date May 25, 2004
title Mycobacterium Smegmatis Stf0 Sulfotransferase With Trehalose
authors J.D.Mougous, C.J.Petzold, R.H.Senaratne, D.H.Lee, D.L.Akey, F.L.L S.E.Munchel, M.R.Pratt, L.W.Riley, J.A.Leary, J.M.Berger, C.R.Be
compound source
Molecule: Stf0 Sulfotransferase
Chain: A, B, C, D
Ec: 2.8.2.-
Engineered: Yes
Organism_scientific: Mycobacterium Smegmatis
Organism_taxid: 1772
Gene: Stf0
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
symmetry Space Group: P 32 2 1
R_factor 0.218 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
101.929 101.929 228.212 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.60 Å
ligand GLC enzyme Transferase E.C.2.8.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceIdentification, function and structure of the mycobacterial sulfotransferase that initiates sulfolipid-1 biosynthesis., Mougous JD, Petzold CJ, Senaratne RH, Lee DH, Akey DL, Lin FL, Munchel SE, Pratt MR, Riley LW, Leary JA, Berger JM, Bertozzi CR, Nat Struct Mol Biol 2004 Aug;11(8):721-9. Epub 2004 Jul 18. PMID:15258569
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk]
  • Biological Unit Coordinates (1tex.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (1tex.pdb2.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 1TEX
  • CSU: Contacts of Structural Units for 1TEX
  • Likely Quarternary Molecular Structure file(s) for 1TEX
  • Structure Factors (316 Kb)
  • Retrieve 1TEX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TEX from S2C, [Save to disk]
  • Re-refined 1tex structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TEX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TEX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TEX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1texa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1texb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1texc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1texd_, region D [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tex_B] [1tex_D] [1tex_C] [1tex_A] [1tex]
  • SWISS-PROT database: [P84151]
  • Domain organization of [P84151_MYCSM] by SWISSPFAM
  • Other resources with information on 1TEX
  • Community annotation for 1TEX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science