1TFU Transferase date May 27, 2004
title Phosphopantetheine Adenylyltransferase From Mycobacterium Tu
authors V.K.Morris, T.Izard, Tb Structural Genomics Consortium (Tbsgc)
compound source
Molecule: Phosphopantetheine Adenylyltransferase
Chain: A
Synonym: Pantetheine- Phosphate Adenylyltransferase, Ppat, Coa Pyrophosphorylase;
Ec: 2.7.7.3
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Coad, Kdtb, Rv2965c, Mt3043, Mtcy349.22, U0002e, Mb29
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21 (De3)
Expression_system_vector: Pet3d
symmetry Space Group: H 3 2
R_factor 0.229 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.623 98.623 114.811 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.99 Å
ligand
enzyme Transferase E.C.2.7.7.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSubstrate-induced asymmetry and channel closure revealed by the apoenzyme structure of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase., Morris VK, Izard T, Protein Sci 2004 Sep;13(9):2547-52. PMID:15322293
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1tfu.pdb1.gz) 155 Kb
  • CSU: Contacts of Structural Units for 1TFU
  • Likely Quarternary Molecular Structure file(s) for 1TFU
  • Retrieve 1TFU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TFU from S2C, [Save to disk]
  • View 1TFU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TFU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TFU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tfua_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tfu] [1tfu_A]
  • SWISS-PROT database: [P0A530]
  • Domain organization of [COAD_MYCTU] by SWISSPFAM
  • Other resources with information on 1TFU
  • Community annotation for 1TFU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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