1TPZ	Signaling Protein	date	Jun 16, 2004
title	Crystal Structure Of Iigp1: A Paradigm For Interferon Induci Resistance Gtpases
authors	A.Ghosh, R.Uthaiah, J.Howard, C.Herrmann, E.Wolf
compound		source
Molecule: Interferon-Inducible Gtpase Chain: A, B Synonym: Iigp1 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Iigp1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex4t1
symmetry	Space Group: P 21 21 21	R_factor 0.208 R_Free 0.241
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.540 91.890 143.470 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	EDO, GDP, MG, MPD	enzyme
related structures	by homologous chain: 1TQ4, 1TQD
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal Structure of IIGP1; A Paradigm for Interferon-Inducible p47 Resistance GTPases., Ghosh A, Uthaiah R, Howard J, Herrmann C, Wolf E, Mol Cell 2004 Sep 10;15(5):727-39. PMID:15350217

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk] Biological Unit Coordinates (1tpz.pdb1.gz) 71 Kb Biological Unit Coordinates (1tpz.pdb2.gz) 73 Kb LPC: Ligand-Protein Contacts for 1TPZ CSU: Contacts of Structural Units for 1TPZ Likely Quarternary Molecular Structure file(s) for 1TPZ Structure Factors (1043 Kb) Retrieve 1TPZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1TPZ from S2C, [Save to disk] Re-refined 1tpz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1TPZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1TPZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1TPZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1tpza_, region A [Jmol] [rasmolscript] [script source]     - Domain d1tpzb_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1tpz] [1tpz_A] [1tpz_B] SWISS-PROT database: [Q9QZ85] Domain organization of [IIGP1_MOUSE] by SWISSPFAM

Other resources with information on 1TPZ

Community annotation for 1TPZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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