1TTI Isomerase(Intramolecular Oxidoreductase) date Apr 19, 1995
title Three New Crystal Structures Of Point Mutation Variants Of M Conformational Flexibility Of Loop-1,Loop-4 And Loop-8
authors K.V.Radha Kishan, R.K.Wierenga
compound source
Molecule: Triosephosphate Isomerase
Chain: A
Ec: 5.3.1.1
Engineered: Yes
Mutation: Yes
Other_details: Monotim With A110w Mutation
Organism_scientific: Trypanosoma Brucei Brucei
Organism_taxid: 5702
Strain: Brucei
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Other_details: Escherichia Coli Strain Xl1-Blue Used For Th Manipulations
symmetry Space Group: C 1 2 1
R_factor 0.178 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.780 46.760 70.390 90.00 113.99 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand PGA enzyme Isomerase E.C.5.3.1.1 BRENDA
related structures by homologous chain: 1MSS, 1TTJ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8., Borchert TV, Kishan KV, Zeelen JP, Schliebs W, Thanki N, Abagyan R, Jaenicke R, Wierenga RK, Structure 1995 Jul 15;3(7):669-79. PMID:8591044
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1tti.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 1TTI
  • CSU: Contacts of Structural Units for 1TTI
  • Likely Quarternary Molecular Structure file(s) for 1TTI
  • Retrieve 1TTI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TTI from S2C, [Save to disk]
  • View 1TTI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TTI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TTI, from MSDmotif at EBI
  • Genome occurence of 1TTI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tti__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tti_A] [1tti]
  • SWISS-PROT database: [P04789]
  • Domain organization of [TPIS_TRYBB] by SWISSPFAM
  • Other resources with information on 1TTI
  • Community annotation for 1TTI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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