1TYC Aminoacyl-Trna Synthase date Jul 06, 1992
title Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna S Enhancement Of Catalysis By Hydrophobic Interactions
authors K.A.Brown, P.Brick, P.De Meester, D.M.Blow
compound source
Molecule: Tyrosyl-Trna Synthetase
Chain: A
Ec: 6.1.1.1
Engineered: Yes
 Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
symmetry Space Group: P 31 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.460 64.460 237.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Ligase E.C.6.1.1.1 BRENDA
related structures by homologous chain: 1TYD, 4TS1
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural analysis of a series of antiviral agents complexed with human rhinovirus 14., Badger J, Minor I, Kremer MJ, Oliveira MA, Smith TJ, Griffith JP, Guerin DM, Krishnaswamy S, Luo M, Rossmann MG, et al., Proc Natl Acad Sci U S A 1988 May;85(10):3304-8. PMID:2835768
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1tyc.pdb1.gz) 104 Kb
  • CSU: Contacts of Structural Units for 1TYC
  • Likely Quarternary Molecular Structure file(s) for 1TYC
  • Retrieve 1TYC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TYC from S2C, [Save to disk]
    • View 1TYC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TYC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TYC, from MSDmotif at EBI
  • Genome occurence of 1TYC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tyc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tyc_A] [1tyc]
  • SWISS-PROT database: [P00952]
  • Domain organization of [SYY_BACST] by SWISSPFAM
    • Other resources with information on 1TYC
  • Community annotation for 1TYC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science