1U5S	Metal Binding Protein	date	Jul 28, 2004
title	Nmr Structure Of The Complex Between Nck-2 Sh3 Domain And Pi Domain
authors	J.Vaynberg, T.Fukuda, O.Vinogradova, A.Velyvis, L.Ng, C.Wu, J.Qin
compound		source
Molecule: Cytoplasmic Protein Nck2 Chain: A Fragment: Third Sh3 Domain (Residues 192-262) Synonym: Nck Adaptor Protein 2, Sh2sh3 Adaptor Protein Nck Nck-2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nck2 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ptyb11
Molecule: Pinch Protein Chain: B Fragment: Fourth Lim Domain (Residues 188-251) Synonym: Particularly Interesting New Cys-His Protein, Lim Senescent Cell Antigen-Like Domains 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lims1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-4t-1
method	Solution NMR
ligand	ZN	enzyme
Primary reference	Structure of an ultraweak protein-protein complex and its crucial role in regulation of cell morphology and motility., Vaynberg J, Fukuda T, Chen K, Vinogradova O, Velyvis A, Tu Y, Ng L, Wu C, Qin J, Mol Cell 2005 Feb 18;17(4):513-23. PMID:15721255

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (661 Kb) [Save to disk] Biological Unit Coordinates (1u5s.pdb1.gz) 36 Kb LPC: Ligand-Protein Contacts for 1U5S CSU: Contacts of Structural Units for 1U5S Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1U5S in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1U5S from S2C, [Save to disk]

View 1U5S in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1U5S

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1U5S, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1u5s_B] [1u5s] [1u5s_A] SWISS-PROT database: [P48059] [O43639] Domain organization of [LIMS1_HUMAN] [NCK2_HUMAN] by SWISSPFAM Domains found in 1U5S: [LIM] [SH3 ] by SMART

Other resources with information on 1U5S

Community annotation for 1U5S at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

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