1U6H	Cell Adhesion	date	Jul 30, 2004
title	Vinculin Head (0-258) In Complex With The Talin Vinculin Binding Site 2 (849-879)
authors	I.Fillingham, A.R.Gingras, E.Papagrigoriou, B.Patel, J.Emsley, G.C.K.Roberts, D.R.Critchley, I.L.Barsukov
compound		source
Molecule: Vinculin Chain: A Fragment: Residues 0-258 Engineered: Yes		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Gene: Vcl, Vinc1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-15b
Molecule: Talin Chain: B Fragment: Vinculin Binding Site 2 (Residues 849-879) Engineered: Yes		Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. The Sequence Of The Peptide Is Naturally Found In Gallus Gallus (Chicken).
symmetry	Space Group: P 21 21 2	R_factor 0.242 R_Free 0.322
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.122 69.154 96.162 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.38 Å
related structures	by homologous chain: 1RKE, 1SYQ
Gene Ontology	Chain Function Process Component A B
Primary reference	A vinculin binding domain from the talin rod unfolds to form a complex with the vinculin head., Fillingham I, Gingras AR, Papagrigoriou E, Patel B, Emsley J, Critchley DR, Roberts GC, Barsukov IL, Structure. 2005 Jan;13(1):65-74. PMID:15642262

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (1u6h.pdb1.gz) 44 Kb CSU: Contacts of Structural Units for 1U6H Likely Quarternary Molecular Structure file(s) for 1U6H Structure Factors (187 Kb) Retrieve 1U6H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1U6H from S2C, [Save to disk] Re-refined 1u6h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1U6H in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1U6H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1U6H, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1u6h_A] [1u6h_B] [1u6h] SWISS-PROT database: [P54939] [P12003] Domain organization of [TLN1_CHICK] [VINC_CHICK] by SWISSPFAM

Other resources with information on 1U6H

Community annotation for 1U6H at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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