1U7M De Novo Protein date Aug 04, 2004
title Solution Structure Of A Diiron Protein Model: Due Ferri(II) Mutant
authors O.Maglio, F.Nastri, J.R.Calhoun, S.Lahr, V.Pavone, W.F.Degrado, A.
compound source
Molecule: Four-Helix Bundle Model
Chain: A, B
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
methodSolution NMR
ligand ZN enzyme
related structures by homologous chain: 1NVO, 1U7J
Primary referenceAnalysis and Design of Turns in alpha-Helical Hairpins., Lahr SJ, Engel DE, Stayrook SE, Maglio O, North B, Geremia S, Lombardi A, Degrado WF, J Mol Biol 2005 Mar 11;346(5):1441-54. Epub 2005 Jan 13. PMID:15713492
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (617 Kb) [Save to disk]
  • Biological Unit Coordinates (1u7m.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 1U7M
  • CSU: Contacts of Structural Units for 1U7M
  • Original NMR restraints for 1U7M from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1U7M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U7M from S2C, [Save to disk]
    • View 1U7M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1U7M
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U7M, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u7m_A] [1u7m] [1u7m_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1U7M
  • Community annotation for 1U7M at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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