1U9C Structural Genomics, Unknown Function date Aug 09, 2004
title Crystallographic Structure Of Apc35852
authors D.Borek, Y.Chen, D.Shao, F.Collart, A.Joachimiak, Z.Otwinowski, Mi Center For Structural Genomics (Mcsg)
compound source
Molecule: Apc35852
Chain: A
Engineered: Yes
 Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 43
R_factor 0.172 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.183 66.183 53.905 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.35 Å
ligand CSD enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1u9c.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1U9C
  • CSU: Contacts of Structural Units for 1U9C
  • Likely Quarternary Molecular Structure file(s) for 1U9C
  • Structure Factors (692 Kb)
  • Retrieve 1U9C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U9C from S2C, [Save to disk]
  • Re-refined 1u9c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1U9C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1U9C
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1U9C from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U9C, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u9ca_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u9c_A] [1u9c]
  • SWISS-PROT database: [Q5KWF3]
  • Domain organization of [Q5KWF3_GEOKA] by SWISSPFAM
    • Other resources with information on 1U9C
  • Community annotation for 1U9C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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