1UC3	Oxygen Storage Transport	date	Apr 08, 2003
title	Crystal Structure Of Hemoglobin I From River Lamprey
authors	M.Seki, M.Yao, Y.Yazawa, I.Tanaka
compound		source
Molecule: Globin Chain: A, B, C, D, E, F, G, H, I, J, K, L Synonym: Hemoglobini		Organism_scientific: Lampetra Fluviatilis Organism_common: European River Lamprey Organism_taxid: 7748
symmetry	Space Group: P 1	R_factor 0.197 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.210 73.610 105.870 103.95 91.52 97.64
method	X-Ray Diffraction	resolution	2.30 Å
ligand	HEM	enzyme
related structures	by homologous chain: 2LHB, 3LHB
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (305 Kb) [Save to disk] Biological Unit Coordinates (1uc3.pdb1.gz) 51 Kb Biological Unit Coordinates (1uc3.pdb2.gz) 53 Kb Biological Unit Coordinates (1uc3.pdb3.gz) 53 Kb Biological Unit Coordinates (1uc3.pdb4.gz) 53 Kb Biological Unit Coordinates (1uc3.pdb5.gz) 53 Kb Biological Unit Coordinates (1uc3.pdb6.gz) 52 Kb Biological Unit Coordinates (1uc3.pdb7.gz) 27 Kb Biological Unit Coordinates (1uc3.pdb8.gz) 27 Kb Biological Unit Coordinates (1uc3.pdb9.gz) 28 Kb LPC: Ligand-Protein Contacts for 1UC3 CSU: Contacts of Structural Units for 1UC3 Likely Quarternary Molecular Structure file(s) for 1UC3 Structure Factors (546 Kb) Retrieve 1UC3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UC3 from S2C, [Save to disk] Re-refined 1uc3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UC3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UC3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UC3, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1uc3a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1uc3b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1uc3c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1uc3d_, region D [Jmol] [rasmolscript] [script source]     - Domain d1uc3e_, region E [Jmol] [rasmolscript] [script source]     - Domain d1uc3f_, region F [Jmol] [rasmolscript] [script source]     - Domain d1uc3g_, region G [Jmol] [rasmolscript] [script source]     - Domain d1uc3h_, region H [Jmol] [rasmolscript] [script source]     - Domain d1uc3i_, region I [Jmol] [rasmolscript] [script source]     - Domain d1uc3j_, region J [Jmol] [rasmolscript] [script source]     - Domain d1uc3k_, region K [Jmol] [rasmolscript] [script source]     - Domain d1uc3l_, region L [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1uc3_L] [1uc3_E] [1uc3_D] [1uc3_C] [1uc3_F] [1uc3_G] [1uc3_H] [1uc3_J] [1uc3_I] [1uc3] [1uc3_K] [1uc3_A] [1uc3_B] SWISS-PROT database: [P02207] Domain organization of [GLB_LAMFL] by SWISSPFAM

Other resources with information on 1UC3

Community annotation for 1UC3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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