1UHW Signaling Protein date Jul 11, 2003
title Solution Structure Of The Dep Domain Of Mouse Pleckstrin
authors K.Inoue, M.Yoshida, R.Hatta, F.Hayashi, M.Shirouzu, T.Terada, T.Ki M.Inoue, T.Yabuki, M.Aoki, E.Seki, T.Matsuda, H.Hirota, A.Tanaka, Y.Matsuo, T.Arakawa, P.Carninci, J.Kawai, Y.Hayashizaki, S.Yokoy Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Pleckstrin
Chain: A
Fragment: Dep Domain
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Riken Cdna 1810074l23
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P011220-04
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
related structures by homologous chain: 1W4M
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (521 Kb) [Save to disk]
  • Biological Unit Coordinates (1uhw.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1UHW
  • Retrieve 1UHW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UHW from S2C, [Save to disk]
    • View 1UHW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UHW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UHW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uhwa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uhw] [1uhw_A]
  • SWISS-PROT database: [Q9JHK5]
  • Domain organization of [PLEK_MOUSE] by SWISSPFAM
  • Domain found in 1UHW: [DEP ] by SMART
    • Other resources with information on 1UHW
  • Community annotation for 1UHW at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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