1UZ4 Hydrolase date Mar 04, 2004
title Common Inhibition Of Beta-Glucosidase And Beta-Mannosidase B Isofagomine Lactam Reflects Different Conformational Intine Glucoside And Mannoside Hydrolysis
authors F.Vincent, G.J.Davies
compound source
Molecule: Man5a
Chain: A
Synonym: Mannosidase
Engineered: Yes
Other_details: Inhibitor Isofagomaninelactam
Organism_scientific: Cellvibrio Mixtus
Organism_common: Cellvibrio Mixtus
Organism_taxid: 39650
Strain: Ncimb 8633
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector: Pet21a
symmetry Space Group: P 21 21 2
R_factor 0.133 R_Free 0.165
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.625 102.370 50.356 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.71 Å
ligand GOL, IFL, SO4 enzyme
related structures by homologous chain: 1UUQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCommon inhibition of both beta-glucosidases and beta-mannosidases by isofagomine lactam reflects different conformational itineraries for pyranoside hydrolysis., Vincent F, Gloster TM, Macdonald J, Morland C, Stick RV, Dias FM, Prates JA, Fontes CM, Gilbert HJ, Davies GJ, Chembiochem. 2004 Nov 5;5(11):1596-9. PMID:15515081
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (1uz4.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 1UZ4
  • CSU: Contacts of Structural Units for 1UZ4
  • Likely Quarternary Molecular Structure file(s) for 1UZ4
  • Structure Factors (738 Kb)
  • Retrieve 1UZ4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UZ4 from S2C, [Save to disk]
  • Re-refined 1uz4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UZ4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UZ4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UZ4, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uz4a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uz4_A] [1uz4]
  • SWISS-PROT database: [Q6QT42]
  • Domain organization of [Q6QT42_9GAMM] by SWISSPFAM
  • Other resources with information on 1UZ4
  • Community annotation for 1UZ4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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