1V0B	Transferase	date	Mar 26, 2004
title	Crystal Structure Of The T198a Mutant Of Pfpk5
authors	S.Holton, A.Merckx, D.Burgess, C.Doerig, M.Noble, J.Endicott
compound		source
Molecule: Cell Division Control Protein 2 Homolog Chain: A, B Synonym: Pfpk5 Ec: 2.7.1.- Engineered: Yes Mutation: Yes		Organism_scientific: Plasmodium Falciparum Organism_taxid: 5833 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.223 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.290 94.653 133.229 90.00 99.19 90.00
method	X-Ray Diffraction	resolution	2.2 Å
ligand		enzyme	Transferase E.C.2.7.1 BRENDA
related structures	by homologous chain: 1QMZ
Gene Ontology	Chain Function Process Component A, B cyclin-dependent protein ser...
Primary reference	Structures of P. falciparum PfPK5 test the CDK regulation paradigm and suggest mechanisms of small molecule inhibition., Holton S, Merckx A, Burgess D, Doerig C, Noble M, Endicott J, Structure (Camb) 2003 Nov;11(11):1329-37. PMID:14604523

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk] Biological Unit Coordinates (1v0b.pdb1.gz) 51 Kb Biological Unit Coordinates (1v0b.pdb2.gz) 47 Kb CSU: Contacts of Structural Units for 1V0B Likely Quarternary Molecular Structure file(s) for 1V0B Structure Factors (483 Kb) Retrieve 1V0B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1V0B from S2C, [Save to disk] Re-refined 1v0b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1V0B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1V0B

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1V0B, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1v0ba_, region A [Jmol] [rasmolscript] [script source]     - Domain d1v0bb_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1v0b] [1v0b_B] [1v0b_A] SWISS-PROT database: [Q07785] Domain organization of [CDC2H_PLAFK] by SWISSPFAM Domain found in 1V0B: [S_TKc ] by SMART

Other resources with information on 1V0B

Community annotation for 1V0B at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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