1V72 Lyase date Dec 09, 2003
title Crystal Structure Of Phenylserine Aldolase From Pseudomonas
authors R.Omi
compound source
Molecule: Aldolase
Chain: A
Ec: 4.1.2.26
Engineered: Yes
 Organism_scientific: Pseudomonas Putida
Organism_taxid: 303
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.217 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.489 95.489 107.115 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand PLP, ZN enzyme Lyase E.C.4.1.2.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1v72.pdb1.gz) 218 Kb
  • LPC: Ligand-Protein Contacts for 1V72
  • CSU: Contacts of Structural Units for 1V72
  • Likely Quarternary Molecular Structure file(s) for 1V72
  • Structure Factors (265 Kb)
  • Retrieve 1V72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V72 from S2C, [Save to disk]
  • Re-refined 1v72 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1V72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1V72
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1V72, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v72] [1v72_A]
  • SWISS-PROT database: [Q59IT3]
  • Domain organization of [Q59IT3_PSEPU] by SWISSPFAM
    • Other resources with information on 1V72
  • Community annotation for 1V72 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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