1W1W Cell Adhesion date Jun 24, 2004
title Sc Smc1hd:Scc1-C Complex, Atpgs
authors C.Haering, K.Nasmyth, J.Lowe
compound source
Molecule: Structural Maintenance Of Chromosome 1
Chain: A, B, C, D
Fragment: Head Domain Residues 1-214,1024-1225
Synonym: Smc1, Da-Box Protein Smc1
Engineered: Yes
Other_details: Residues 1-214, Esskhptslvprgs Linker, 1024-
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector: Baculovirus

Molecule: Sister Chromatid Cohesion Protein 1
Chain: E, F, G, H
Fragment: C-Terminal Domain Residues 451-563
Synonym: Scc1
Engineered: Yes
Other_details: Residues 451-566

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector: Baculovirus
symmetry Space Group: P 43 21 2
R_factor 0.242 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
138.465 138.465 284.074 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand AGS, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure and stability of cohesin's Smc1-kleisin interaction., Haering CH, Schoffnegger D, Nishino T, Helmhart W, Nasmyth K, Lowe J, Mol Cell. 2004 Sep 24;15(6):951-64. PMID:15383284
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk]
  • Biological Unit Coordinates (1w1w.pdb1.gz) 69 Kb
  • Biological Unit Coordinates (1w1w.pdb2.gz) 60 Kb
  • Biological Unit Coordinates (1w1w.pdb3.gz) 69 Kb
  • Biological Unit Coordinates (1w1w.pdb4.gz) 69 Kb
  • Biological Unit Coordinates (1w1w.pdb5.gz) 124 Kb
  • Biological Unit Coordinates (1w1w.pdb6.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 1W1W
  • CSU: Contacts of Structural Units for 1W1W
  • Likely Quarternary Molecular Structure file(s) for 1W1W
  • Structure Factors (454 Kb)
  • Retrieve 1W1W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W1W from S2C, [Save to disk]
  • Re-refined 1w1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W1W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W1W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W1W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1w1wa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1w1wb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1w1wc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1w1wd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1w1we_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1w1wf_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1w1wg_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1w1wh_, region H [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w1w_C] [1w1w_D] [1w1w_A] [1w1w_E] [1w1w] [1w1w_G] [1w1w_H] [1w1w_B] [1w1w_F]
  • SWISS-PROT database: [Q12158] [P32908]
  • Domain organization of [SCC1_YEAST] [SMC1_YEAST] by SWISSPFAM
  • Other resources with information on 1W1W
  • Community annotation for 1W1W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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