1W8I Structural Genomics, Unknown Function date Sep 22, 2004
title The Structure Of Gene Product Af1683 From Archaeoglobus Fulg
authors Midwest Center For Structural Genomics (Mcsg), M.E.Cuff, R.Zha S.L.Ginell, X.Xu, A.Savchenko, A.Edwards, A.Joachimiak
compound source
Molecule: Putative Vapc Ribonuclease Af_1683
Chain: A
Synonym: Hypothetical Protein Af1683, Putative Toxin Af_168 Putative Rnase Af_1683;
Ec: 3.1.-.-
Engineered: Yes
Other_details: Gene Product Af1683 From Archaeoglobus Fulgi
 Organism_scientific: Archaeoglobus Fulgidus
Organism_taxid: 224325
Strain: Dsm 4304
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: P11
symmetry Space Group: P 65 2 2
R_factor 0.211 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.730 66.730 181.381 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand MSE enzyme Hydrolase E.C.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endoribonuclease activity
  • ribonuclease activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (1w8i.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1W8I
  • CSU: Contacts of Structural Units for 1W8I
  • Likely Quarternary Molecular Structure file(s) for 1W8I
  • Structure Factors (205 Kb)
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  • SEQRES to COORDINATES correlation for 1W8I from S2C, [Save to disk]
  • Re-refined 1w8i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Electron Density related parameters from EDS Electron Density Server, at Upsala
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  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1w8ia_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w8i_A] [1w8i]
  • SWISS-PROT database: [O28590]
  • Domain organization of [Y1683_ARCFU] by SWISSPFAM
  • Domain found in 1W8I: [PINc ] by SMART
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