1WBE Lipid Transport date Nov 01, 2004
title X-Ray Structure Of Bovine Gltp
authors T.T.Airenne, H.Kidron, G.West, Y.Nymalm, M.Nylund, P.Mattjus, T.A.
compound source
Molecule: Glycolipid Transfer Protein
Chain: A
Synonym: Gltp
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.184 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.741 35.393 58.423 90.00 116.55 90.00
method X-Ray Diffractionresolution 1.36 Å
ligand DKA, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • ceramide 1-phosphate transpo...


  • Primary referenceStructural evidence for adaptive ligand binding of glycolipid transfer protein., Airenne TT, Kidron H, Nymalm Y, Nylund M, West G, Mattjus P, Salminen TA, J Mol Biol. 2006 Jan 13;355(2):224-36. Epub 2005 Nov 8. PMID:16309699
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1wbe.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 1WBE
  • CSU: Contacts of Structural Units for 1WBE
  • Likely Quarternary Molecular Structure file(s) for 1WBE
  • Structure Factors (603 Kb)
  • Retrieve 1WBE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WBE from S2C, [Save to disk]
  • Re-refined 1wbe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1WBE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WBE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WBE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wbe_A] [1wbe]
  • SWISS-PROT database: [P68265]
  • Domain organization of [GLTP_BOVIN] by SWISSPFAM
  • Other resources with information on 1WBE
  • Community annotation for 1WBE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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