1WCO Peptide Antibiotic date Nov 19, 2004
title The Solution Structure Of The Nisin-Lipid II Complex
authors S.T.D.Hsu, E.Breukink, E.Tischenko, M.A.G.Lutters, B.De Kruijff R.Kaptein, A.M.J.J.Bonvin, N.A.J.Van Nuland
compound source
Molecule: Ala-Fga-Lys-Dal-Dal Peptide
Chain: L
Organism_scientific: Monarthropalpus Flavus
Organism_taxid: 71816

Molecule: Lantibiotic
Chain: N

Organism_scientific: Lactococcus Lactis
Organism_taxid: 1358
methodSolution NMR
ligand DAL, DBB, DBU, DHA, FDF, FGA, MUB, NAG enzyme
note 1WCO supersedes 1UZT
Gene
Ontology
ChainFunctionProcessComponent
N


Primary referenceThe nisin-lipid II complex reveals a pyrophosphate cage that provides a blueprint for novel antibiotics., Hsu ST, Breukink E, Tischenko E, Lutters MA, de Kruijff B, Kaptein R, Bonvin AM, van Nuland NA, Nat Struct Mol Biol. 2004 Oct;11(10):963-7. Epub 2004 Sep 12. PMID:15361862
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (248 Kb) [Save to disk]
  • Biological Unit Coordinates (1wco.pdb1.gz) 14 Kb
  • LPC: Ligand-Protein Contacts for 1WCO
  • CSU: Contacts of Structural Units for 1WCO
  • Original NMR restraints for 1WCO from PDB
  • Retrieve 1WCO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WCO from S2C, [Save to disk]
  • View 1WCO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WCO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WCO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wco] [1wco_N] [1wco_L]
  • SWISS-PROT database: [P29559]
  • Domain organization of [LANZ_LACLA] by SWISSPFAM
  • Other resources with information on 1WCO
  • Community annotation for 1WCO at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science