1WF9 Structural Genomics, Unknown Function date May 26, 2004
title Solution Structure Of A Novel Beta-Grasp Fold Like Domain Of Hypothetical Protein (Arabidopsis Thaliana)
authors X.Qin, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteom Initiative (Rsgi)
compound source
Molecule: Npl4 Family Protein
Chain: A
Fragment: Hypothetical Domain
Engineered: Yes
 Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale Cress
Organism_taxid: 3702
Gene: Riken Rafl09-18-B15
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P030212-84
Other_details: Cell Free Protein Synthesis
methodSolution NMR
note 1WF9 is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (539 Kb) [Save to disk]
  • Biological Unit Coordinates (1wf9.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1WF9
  • Original NMR restraints for 1WF9 from PDB
  • Retrieve 1WF9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WF9 from S2C, [Save to disk]
    • View 1WF9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WF9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WF9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wf9] [1wf9_A]
  • SWISS-PROT database: [Q9LYC2]
  • Domain organization of [NPL41_ARATH] by SWISSPFAM
    • Other resources with information on 1WF9
  • Community annotation for 1WF9 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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