1WN8 Plant Protein date Jul 28, 2004
title Nmr Structure Of Oantr
authors J.L.Dutton, R.F.Renda, C.Waine, R.J.Clark, N.L.Daly, C.V.Jennings M.A.Anderson, D.J.Craik
compound source
Molecule: Kalata B3b6
Chain: A
Fragment: N-Terminal Repeat
Synonym: Oantr Protein
Engineered: Yes
 Synthetic: Yes
Other_details: Syn Peptide Based On N-Terminal Repeat Seque Cyclotide Precursors From The Plant Oldenlandia Affinis
methodSolution NMR
Primary referenceConserved structural and sequence elements implicated in the processing of gene-encoded circular proteins., Dutton JL, Renda RF, Waine C, Clark RJ, Daly NL, Jennings CV, Anderson MA, Craik DJ, J Biol Chem 2004 Aug 24;. PMID:15328347
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (1wn8.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 1WN8
  • Retrieve 1WN8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WN8 from S2C, [Save to disk]
    • View 1WN8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WN8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WN8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1wn8a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wn8] [1wn8_A]
  • SWISS-PROT database: [P58455]
  • Domain organization of [KAB3_OLDAF] by SWISSPFAM
    • Other resources with information on 1WN8
  • Community annotation for 1WN8 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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