1WOF	Hydrolase	date	Aug 18, 2004
title	Crystal Structure Of Sars-Cov Mpro In Complex With An Inhibitor N1
authors	H.Yang, M.Bartlam, X.Xue, K.Yang, W.Liang, Z.Rao
compound		source
Molecule: 3c-Like Proteinase Chain: A, B Ec: 3.4.24.- Engineered: Yes		Organism_scientific: Sars Coronavirus Organism_taxid: 227859 Strain: Bj01 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-6p-1
symmetry	Space Group: P 1 21 1	R_factor 0.201 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.683 95.345 67.530 90.00 103.57 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	I12	enzyme	Hydrolase E.C.3.4.24 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Design of Wide-Spectrum Inhibitors Targeting Coronavirus Main Proteases., Yang H, Xie W, Xue X, Yang K, Ma J, Liang W, Zhao Q, Zhou Z, Pei D, Ziebuhr J, Hilgenfeld R, Yuen KY, Wong L, Gao G, Chen S, Chen Z, Ma D, Bartlam M, Rao Z, PLoS Biol 2005 Sep 6;3(10):e324. PMID:16128623

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk] Biological Unit Coordinates (1wof.pdb1.gz) 103 Kb LPC: Ligand-Protein Contacts for 1WOF CSU: Contacts of Structural Units for 1WOF Likely Quarternary Molecular Structure file(s) for 1WOF Structure Factors (610 Kb) Retrieve 1WOF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WOF from S2C, [Save to disk] Re-refined 1wof structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WOF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WOF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WOF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wof] [1wof_B] [1wof_A] SWISS-PROT database: [P0C6X7] [P0C6U8] Domain organization of [R1AB_CVHSA] [R1A_CVHSA] by SWISSPFAM

Other resources with information on 1WOF

Community annotation for 1WOF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---