1WWL	Immune System	date	Jan 06, 2005
title	Crystal Structure Of Cd14
authors	J.I.Kim, C.J.Lee, M.S.Jin, C.H.Lee, S.G.Paik, H.Lee, J.O.Lee
compound		source
Molecule: Monocyte Differentiation Antigen Cd14 Chain: A, B Fragment: Residues 3-314 Synonym: Myeloid Cell-Specific Leucine-Rich Glycoprotein Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.215 R_Free 0.278
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.519 117.705 102.395 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	NAG	enzyme
Primary reference	Crystal structure of CD14 and its implications for lipopolysaccharide signaling., Kim JI, Lee CJ, Jin MS, Lee CH, Paik SG, Lee H, Lee JO, J Biol Chem 2005 Mar 25;280(12):11347-51. Epub 2005 Jan 10. PMID:15644310

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk] Biological Unit Coordinates (1wwl.pdb1.gz) 104 Kb Biological Unit Coordinates (1wwl.pdb2.gz) 53 Kb Biological Unit Coordinates (1wwl.pdb3.gz) 54 Kb LPC: Ligand-Protein Contacts for 1WWL CSU: Contacts of Structural Units for 1WWL Likely Quarternary Molecular Structure file(s) for 1WWL Structure Factors (256 Kb) Retrieve 1WWL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WWL from S2C, [Save to disk] Re-refined 1wwl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WWL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WWL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WWL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wwl_B] [1wwl_A] [1wwl] SWISS-PROT database: [P10810] Domain organization of [CD14_MOUSE] by SWISSPFAM

Other resources with information on 1WWL

Community annotation for 1WWL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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