1X24	Hydrolase	date	Apr 20, 2005
title	Prl-1 (Ptp4a)
authors	Z.Y.Zhang, J.P.Sun, S.Liu, W.Q.Wang, H.Yang
compound		source
Molecule: Protein Tyrosine Phosphatase 4a1 Chain: A, B Fragment: Residues 1-160 Synonym: Prl-1, Ptp4a1 Ec: 3.1.3.48 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: I 21 3	R_factor 0.241 R_Free 0.285
crystal cell	length a length b length c angle alpha angle beta angle gamma 146.891 146.891 146.891 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand		enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A, B phosphoprotein phosphatase a... protein tyrosine phosphatase... protein tyrosine/serine/thre...
Primary reference	Structure and Biochemical Properties of PRL-1, a Phosphatase Implicated in Cell Growth, Differentiation, and Tumor Invasion(,)., Sun JP, Wang WQ, Yang H, Liu S, Liang F, Fedorov AA, Almo SC, Zhang ZY, Biochemistry 2005 Sep 13;44(36):12009-21. PMID:16142898

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (1x24.pdb1.gz) 46 Kb CSU: Contacts of Structural Units for 1X24 Likely Quarternary Molecular Structure file(s) for 1X24 Structure Factors (77 Kb) Retrieve 1X24 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1X24 from S2C, [Save to disk] Re-refined 1x24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1X24 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1X24

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1X24, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1x24_B] [1x24] [1x24_A] SWISS-PROT database: [Q78EG7] Domain organization of [TP4A1_RAT] by SWISSPFAM Domain found in 1X24: [PTPc_DSPc ] by SMART

Other resources with information on 1X24

Community annotation for 1X24 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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