1XFS Structural Genomics, Unknown Function date Sep 15, 2004
title X-Ray Crystal Structure Of Protein Ne0264 From Nitrosomonas Northeast Structural Genomics Consortium Target Ner5.
authors F.Forouhar, M.Abashidze, S.M.Vorobiev, M.Ciano, L.C.Ma, R.Shastr T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structur Genomics Consortium (Nesg)
compound source
Molecule: Conserved Hypothetical Protein
Chain: A, B
Synonym: Nc_840354
Engineered: Yes
 Organism_scientific: Nitrosomonas Europaea
Organism_taxid: 228410
Strain: Atcc 19718
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet21
Expression_system_plasmid: Bl21
symmetry Space Group: P 1 21 1
R_factor 0.221 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.390 63.197 65.514 90.00 97.87 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (1xfs.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1XFS
  • CSU: Contacts of Structural Units for 1XFS
  • Likely Quarternary Molecular Structure file(s) for 1XFS
  • Structure Factors (1101 Kb)
  • Retrieve 1XFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XFS from S2C, [Save to disk]
  • Re-refined 1xfs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XFS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XFS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xfsa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1xfsb_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xfs_A] [1xfs_B] [1xfs]
  • SWISS-PROT database: [Q82XK1]
  • Domain organization of [Q82XK1_NITEU] by SWISSPFAM
    • Other resources with information on 1XFS
  • Community annotation for 1XFS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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