1XIZ Structural Genomics, Unknown Function date Sep 22, 2004
title Structural Genomics, The Crystal Structure Of Domain Iia Of Putative Phosphotransferase System Specific For Mannitolfructose From Salmonella Typhimurium
authors R.Zhang, G.Joachimiak, Z.Otwinowski, F.Collart, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Putative Phosphotransferase System Mannitolfructose-Specific Iia Domain;
Chain: A, B
Engineered: Yes
 Organism_scientific: Salmonella Typhimurium
Organism_taxid: 602
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdm68
symmetry Space Group: P 21 21 21
R_factor 0.203 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.875 48.138 123.883 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1xiz.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (1xiz.pdb2.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1XIZ
  • Likely Quarternary Molecular Structure file(s) for 1XIZ
  • Structure Factors (308 Kb)
  • Retrieve 1XIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XIZ from S2C, [Save to disk]
  • Re-refined 1xiz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XIZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XIZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xiza_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1xizb_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xiz_B] [1xiz] [1xiz_A]
  • SWISS-PROT database: [Q8ZL18]
  • Domain organization of [Q8ZL18_SALTY] by SWISSPFAM
    • Other resources with information on 1XIZ
  • Community annotation for 1XIZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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