1XK9 Transferase date Sep 28, 2004
title Pseudomanas Exotoxin A In Complex With The Pj34 Inhibitor
authors S.P.Yates, P.J.Taylor, R.Joergensen, D.Ferrraris, J.Zhang, G.R.An A.R.Merrill
compound source
Molecule: Exotoxin A
Chain: A, B
Fragment: Catalytic Fragment, Pe24h
Synonym: Nad-Dependent Adp-Ribosyltransferase
Ec: 2.4.2.36
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bb101
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pe(Delta)5-399
symmetry Space Group: P 21 21 21
R_factor 0.213 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.040 78.680 91.690 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand P34 enzyme Transferase E.C.2.4.2.36 BRENDA
related structures by homologous chain: 1AER, 1IKQ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure-function analysis of water-soluble inhibitors of the catalytic domain of exotoxin A from Pseudomonas aeruginosa., Yates SP, Taylor PL, Jorgensen R, Ferraris D, Zhang J, Andersen GR, Merrill AR, Biochem J 2005 Feb 1;385(Pt 3):667-75. PMID:15458385
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (1xk9.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (1xk9.pdb2.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1XK9
  • CSU: Contacts of Structural Units for 1XK9
  • Likely Quarternary Molecular Structure file(s) for 1XK9
  • Structure Factors (211 Kb)
  • Retrieve 1XK9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XK9 from S2C, [Save to disk]
  • Re-refined 1xk9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XK9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XK9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XK9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xk9_B] [1xk9] [1xk9_A]
  • SWISS-PROT database: [P11439]
  • Belongs to the pseudomonas exotoxin a (p-exoa) family according to TCDB.
  • Domain organization of [TOXA_PSEAE] by SWISSPFAM
  • Other resources with information on 1XK9
  • Community annotation for 1XK9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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