1XQ9 Structural Genomics, Unknown Function date Oct 11, 2004
title Structure Of Phosphoglycerate Mutase From Plasmodium Falcipa Resolution
authors J.M.Caruthers, W.G.J.Hol, Structural Genomics Of Pathogenic Pr Consortium (Sgpp)
compound source
Molecule: Phosphoglycerate Mutase
Chain: A, B
Synonym: Pgam
Engineered: Yes
 Organism_scientific: Plasmodium Falciparum
Organism_common: Malaria Parasite P. Falciparum
Organism_taxid: 5833
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Star
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Bg1861
symmetry Space Group: C 1 2 1
R_factor 0.207 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.241 71.516 74.883 90.00 113.79 90.00
method X-Ray Diffractionresolution 2.58 Å
ligand SCN enzyme
related structures by homologous chain: 1E59
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (1xq9.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 1XQ9
  • CSU: Contacts of Structural Units for 1XQ9
  • Likely Quarternary Molecular Structure file(s) for 1XQ9
  • Structure Factors (253 Kb)
  • Retrieve 1XQ9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XQ9 from S2C, [Save to disk]
  • Re-refined 1xq9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XQ9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XQ9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XQ9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xq9a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1xq9b_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xq9_A] [1xq9] [1xq9_B]
  • SWISS-PROT database: [Q8IIG6]
  • Domain organization of [Q8IIG6_PLAF7] by SWISSPFAM
  • Domain found in 1XQ9: [PGAM ] by SMART
    • Other resources with information on 1XQ9
  • Community annotation for 1XQ9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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