1XT7 Antibiotic date Oct 21, 2004
title Daptomycin Nmr Structure
authors L.J.Ball, C.M.Goult, J.A.Donarski, J.Micklefield, V.Ramesh
compound source
Molecule: Daptomycin
Chain: A
Synonym: A21978c, Cubicin
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Streptomyces Roseosporus
Organism_taxid: 67294
methodSolution NMR
ligand DAL, DKA, DSG, DSN, KYN, LME, ORN enzyme
Primary referenceNMR structure determination and calcium binding effects of lipopeptide antibiotic daptomycin., Ball LJ, Goult CM, Donarski JA, Micklefield J, Ramesh V, Org Biomol Chem 2004 Jul 7;2(13):1872-8. Epub 2004 Jun 15. PMID:15227539
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (8 Kb) [Save to disk]
  • Biological Unit Coordinates (1xt7.pdb1.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 1XT7
  • CSU: Contacts of Structural Units for 1XT7
  • Original NMR restraints for 1XT7 from PDB
  • Retrieve 1XT7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XT7 from S2C, [Save to disk]
    • View 1XT7 in 3D
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    • Visual 3D analysis of 1XT7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XT7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xt7] [1xt7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1XT7
  • Community annotation for 1XT7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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