1Y0J	Dna Binding Protein	date	Nov 15, 2004
title	Zinc Fingers As Protein Recognition Motifs: Structural Basis Gata-1friend Of Gata Interaction
authors	C.K.Liew, R.J.Y.Simpson, A.H.Y.Kwan, L.A.Crofts, F.E.Loughlin, J.M.Matthews, M.Crossley, J.P.Mackay
compound		source
Molecule: Erythroid Transcription Factor Chain: A Fragment: Gnf Synonym: Gata-1, Eryf1, Gf-1, Nf-E1 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Gata-1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-2t
Molecule: Zinc-Finger Protein Ush Chain: B Fragment: Usf1 Synonym: U-Shaped Transcription Factor, U-Shaped Protein Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Fruit Fly Organism_taxid: 7227 Gene: U-Shaped Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-2t
method	Solution NMR
ligand	ZN	enzyme
note	1Y0J (Molecule of the Month:pdb87)
related structures	by homologous chain: 1GNF
Gene Ontology	Chain Function Process Component A B
Primary reference	Zinc fingers as protein recognition motifs: Structural basis for the GATA-1/Friend of GATA interaction., Liew CK, Simpson RJ, Kwan AH, Crofts LA, Loughlin FE, Matthews JM, Crossley M, Mackay JP, Proc Natl Acad Sci U S A 2005 Jan 18;102(3):583-8. Epub 2005 Jan 11. PMID:15644435

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (382 Kb) [Save to disk] Biological Unit Coordinates (1y0j.pdb1.gz) 19 Kb LPC: Ligand-Protein Contacts for 1Y0J CSU: Contacts of Structural Units for 1Y0J Original NMR restraints for 1Y0J from PDB Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1Y0J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y0J from S2C, [Save to disk]

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Visual 3D analysis of 1Y0J

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Y0J, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y0j] [1y0j_A] [1y0j_B] SWISS-PROT database: [P17679] [Q9VPQ6] Domain organization of [GATA1_MOUSE] [USH_DROME] by SWISSPFAM Domains found in 1Y0J: [ZnF_C2H2] [ZnF_GATA ] by SMART

Other resources with information on 1Y0J

Community annotation for 1Y0J at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

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