1YGH	Gene Regulation	date	May 27, 1999
title	Hat Domain Of Gcn5 From Saccharomyces Cerevisiae
authors	R.C.Trievel, J.R.Rojas, D.E.Sterner, R.Venkataramani, L.Wang, J.Z C.D.Allis, S.L.Berger, R.Marmorstein
compound		source
Molecule: Protein (Transcriptional Activator Gcn5) Chain: A, B Fragment: Histone Acetyltransferase Domain Synonym: Ada4 Ec: 2.3.1.48 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Cellular_location: Nuclear Gene: Gcn5 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Bacterial Plasmid Expression_system_plasmid: Prset Expression_system_gene: Gcn5
symmetry	Space Group: P 1 21 1	R_factor 0.195 R_Free 0.236
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.040 66.510 80.190 90.00 97.71 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	GOL	enzyme	Transferase E.C.2.3.1.48 BRENDA
related structures	by homologous chain: 1Z4R
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure and mechanism of histone acetylation of the yeast GCN5 transcriptional coactivator., Trievel RC, Rojas JR, Sterner DE, Venkataramani RN, Wang L, Zhou J, Allis CD, Berger SL, Marmorstein R, Proc Natl Acad Sci U S A 1999 Aug 3;96(16):8931-6. PMID:10430873

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (1ygh.pdb1.gz) 30 Kb Biological Unit Coordinates (1ygh.pdb2.gz) 30 Kb LPC: Ligand-Protein Contacts for 1YGH CSU: Contacts of Structural Units for 1YGH Likely Quarternary Molecular Structure file(s) for 1YGH Retrieve 1YGH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YGH from S2C, [Save to disk]

View 1YGH in 3D

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Visual 3D analysis of 1YGH

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YGH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ygha_, region A [Jmol] [rasmolscript] [script source]     - Domain d1yghb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ygh_B] [1ygh] [1ygh_A] SWISS-PROT database: [Q03330] Domain organization of [GCN5_YEAST] by SWISSPFAM

Other resources with information on 1YGH

Community annotation for 1YGH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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