1Z64 Antimicrobial Protein date Mar 21, 2005
title Nmr Solution Structure Of Pleurocidin In Dpc Micelles
authors R.T.Syvitski, I.Burton, N.R.Mattatall, S.E.Douglas, D.L.Jakeman
compound source
Molecule: Pleruocidin
Chain: A
Fragment: Residues 23-47
Engineered: Yes
 Organism_scientific: Pseudopleuronectes Americanus
Organism_common: Winter Flounder
Organism_taxid: 8265
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
methodSolution NMR
ligand NH2 enzyme
note 1Z64 is a representative structure
Primary referenceStructural characterization of the antimicrobial Peptide pleurocidin from winter flounder., Syvitski RT, Burton I, Mattatall NR, Douglas SE, Jakeman DL, Biochemistry 2005 May 17;44(19):7282-93. PMID:15882067
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1z64.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 1Z64
  • CSU: Contacts of Structural Units for 1Z64
  • Retrieve 1Z64 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z64 from S2C, [Save to disk]
    • View 1Z64 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1Z64
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z64, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z64] [1z64_A]
  • SWISS-PROT database: [P81941]
  • Domain organization of [PLE1_PSEAM] by SWISSPFAM
    • Other resources with information on 1Z64
  • Community annotation for 1Z64 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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