1ZCN Isomerase date Apr 12, 2005
title Human Pin1 Ng Mutant
authors M.Jager, Y.Zhang, H.Nguyen, G.Dendel, M.E.Bowman, M.Gruebele, J.P. J.W.Kelly
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Nima-Interact
Chain: A
Synonym: Rotamase Pin1, Ppiase Pin1
Ec: 5.2.1.8
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pin1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 43 21 2
R_factor 0.226 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.108 49.108 135.095 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 1PE, PO4 enzyme Isomerase E.C.5.2.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-function-folding relationship in a WW domain., Jager M, Zhang Y, Bieschke J, Nguyen H, Dendle M, Bowman ME, Noel JP, Gruebele M, Kelly JW, Proc Natl Acad Sci U S A. 2006 Jul 11;103(28):10648-53. Epub 2006 Jun 28. PMID:16807295
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (1zcn.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 1ZCN
  • CSU: Contacts of Structural Units for 1ZCN
  • Likely Quarternary Molecular Structure file(s) for 1ZCN
  • Structure Factors (106 Kb)
  • Retrieve 1ZCN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZCN from S2C, [Save to disk]
  • Re-refined 1zcn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZCN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZCN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZCN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zcn_A] [1zcn]
  • SWISS-PROT database: [Q13526]
  • Domain organization of [PIN1_HUMAN] by SWISSPFAM
  • Domain found in 1ZCN: [WW ] by SMART
  • Other resources with information on 1ZCN
  • Community annotation for 1ZCN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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