1ZK9 Transcription date May 02, 2005
title Nf-Kb Relb Forms An Intertwined Homodimer
authors D.B.Huang, D.Vu, G.Ghosh
compound source
Molecule: Transcription Factor Relb
Chain: A
Fragment: Dimerization Domain
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Relb
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: T7 Promoter
Expression_system_plasmid: Pet15b
symmetry Space Group: P 31 2 1
R_factor 0.195 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.200 69.200 64.740 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.18 Å
related structures by homologous chain: 1ZKA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNF-kappaB RelB Forms an Intertwined Homodimer., Huang DB, Vu D, Ghosh G, Structure (Camb) 2005 Sep;13(9):1365-73. PMID:16154093
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1zk9.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 1ZK9
  • Likely Quarternary Molecular Structure file(s) for 1ZK9
  • Retrieve 1ZK9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZK9 from S2C, [Save to disk]
    • View 1ZK9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZK9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZK9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zk9] [1zk9_A]
  • SWISS-PROT database: [Q04863]
  • Domain organization of [RELB_MOUSE] by SWISSPFAM
  • Domain found in 1ZK9: [IPT ] by SMART
    • Other resources with information on 1ZK9
  • Community annotation for 1ZK9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science