1ZP2	Transcription Cell Cycle	date	May 16, 2005
title	Structure Of The Mediator Subunit Cyclin C
authors	S.Hoeppner, S.Baumli, P.Cramer
compound		source
Molecule: Rna Polymerase II Holoenzyme Cyclin-Like Subunit Chain: A Synonym: Suppressor Of Rna Polymerase B Srb11 Engineered: Yes		Organism_scientific: Schizosaccharomyces Pombe Organism_common: Fission Yeast Organism_taxid: 4896 Gene: Srb11 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-Codonplus (De3)-Ril Expression_system_vector_type: Plasmid Expression_system_vector: Pet28d
symmetry	Space Group: P 31 2 1	R_factor 0.244 R_Free 0.288
crystal cell	length a length b length c angle alpha angle beta angle gamma 91.700 91.700 91.100 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.00 Å
Gene Ontology	Chain Function Process Component A cyclin-dependent protein ser... mediator complex
Primary reference	Structure of the Mediator Subunit Cyclin C and its Implications for CDK8 Function., Hoeppner S, Baumli S, Cramer P, J Mol Biol 2005 Jul 29;350(5):833-42. PMID:15979093

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk] Biological Unit Coordinates (1zp2.pdb1.gz) 36 Kb Biological Unit Coordinates (1zp2.pdb2.gz) 72 Kb CSU: Contacts of Structural Units for 1ZP2 Likely Quarternary Molecular Structure file(s) for 1ZP2 Structure Factors (70 Kb) Retrieve 1ZP2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1ZP2 from S2C, [Save to disk] Re-refined 1zp2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1ZP2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1ZP2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1ZP2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1zp2] [1zp2_A] SWISS-PROT database: [O94503] Domain organization of [SRB11_SCHPO] by SWISSPFAM Domain found in 1ZP2: [CYCLIN ] by SMART

Other resources with information on 1ZP2

Community annotation for 1ZP2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---