1ZZL Transferase date Jun 14, 2005
title Crystal Structure Of P38 With Triazolopyridine
authors K.F.Mcclure, S.Han
compound source
Molecule: Mitogen-Activated Protein Kinase 14
Chain: A
Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug Binding Csaid Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a;
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk14, Csbp, Csbp1, Csbp2, Mxi2
symmetry Space Group: P 21 21 21
R_factor 0.220 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.457 86.631 122.857 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand TZY BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTheoretical and experimental design of atypical kinase inhibitors: application to p38 MAP kinase., McClure KF, Abramov YA, Laird ER, Barberia JT, Cai W, Carty TJ, Cortina SR, Danley DE, Dipesa AJ, Donahue KM, Dombroski MA, Elliott NC, Gabel CA, Han S, Hynes TR, Lemotte PK, Mansour MN, Marr ES, Letavic MA, Pandit J, Ripin DB, Sweeney FJ, Tan D, Tao Y, J Med Chem 2005 Sep 8;48(18):5728-37. PMID:16134941
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (1zzl.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 1ZZL
  • CSU: Contacts of Structural Units for 1ZZL
  • Likely Quarternary Molecular Structure file(s) for 1ZZL
  • Structure Factors (241 Kb)
  • Retrieve 1ZZL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZZL from S2C, [Save to disk]
  • Re-refined 1zzl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZZL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZZL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZZL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zzl_A] [1zzl]
  • SWISS-PROT database: [Q16539]
  • Domain organization of [MK14_HUMAN] by SWISSPFAM
  • Domain found in 1ZZL: [S_TKc ] by SMART
  • Other resources with information on 1ZZL
  • Community annotation for 1ZZL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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