2BGU Transferase (Glycosyltransferase) date Jun 09, 1994
title Crystal Structure Of The Dna Modifying Enzyme Beta-Glucosylt In The Presence And Absence Of The Substrate Uridine Diphos
authors A.Vrielink, W.Rueger, H.P.C.Driessen, P.S.Freemont
compound source
Molecule: Beta-Glucosyltransferase
Chain: A
Ec: 2.4.1.27
Engineered: Yes
Organism_scientific: Enterobacteria Phage T4
Organism_taxid: 10665
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.191 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
151.920 52.260 52.740 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand UDP enzyme Transferase E.C.2.4.1.27 BRENDA
related structures by homologous chain: 1NZF, 2BGT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the DNA modifying enzyme beta-glucosyltransferase in the presence and absence of the substrate uridine diphosphoglucose., Vrielink A, Ruger W, Driessen HP, Freemont PS, EMBO J 1994 Aug 1;13(15):3413-22. PMID:8062817
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2bgu.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 2BGU
  • CSU: Contacts of Structural Units for 2BGU
  • Likely Quarternary Molecular Structure file(s) for 2BGU
  • Retrieve 2BGU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BGU from S2C, [Save to disk]
  • View 2BGU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BGU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BGU, from MSDmotif at EBI
  • Genome occurence of 2BGU's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2bgu__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bgu_A] [2bgu]
  • SWISS-PROT database: [P04547]
  • Domain organization of [GSTB_BPT4] by SWISSPFAM
  • Other resources with information on 2BGU
  • Community annotation for 2BGU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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