2A4L Transferase date Jun 29, 2005
title Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
authors W.F.De Azevedo Jr., S.H.Kim
compound source
Molecule: Homo Sapiens Cyclin-Dependent Kinase 2
Chain: A
Synonym: Cdk2
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9 Cells
Expression_system_plasmid: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.173 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.307 73.069 54.284 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand RRC BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInhibition of cyclin-dependent kinases by purine analogues: crystal structure of human cdk2 complexed with roscovitine., De Azevedo WF, Leclerc S, Meijer L, Havlicek L, Strnad M, Kim SH, Eur J Biochem. 1997 Jan 15;243(1-2):518-26. PMID:9030780
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2a4l.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2A4L
  • CSU: Contacts of Structural Units for 2A4L
  • Likely Quarternary Molecular Structure file(s) for 2A4L
  • Structure Factors (69 Kb)
  • Retrieve 2A4L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A4L from S2C, [Save to disk]
  • Re-refined 2a4l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A4L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A4L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A4L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a4l_A] [2a4l]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 2A4L: [S_TKc ] by SMART
  • Other resources with information on 2A4L
  • Community annotation for 2A4L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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