2AFE Ligand Binding Protein date Jul 25, 2005
title Solution Structure Of Asl1650, An Acyl Carrier Protein From Sp. Pcc 7120 With A Variant Phosphopantetheinylation-Site S
authors M.A.Johnson, W.Peti, T.Herrmann, I.A.Wilson, K.Wuthrich, Joint Ce Structural Genomics (Jcsg)
compound source
Molecule: Protein Asl1650
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Nostoc Sp.
Organism_taxid: 103690
Strain: Pcc 7120
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-Ril (Stratagene)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
Other_details: Synonym Nostoc Sp. Pcc 7120
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of Asl1650, an acyl carrier protein from Anabaena sp. PCC 7120 with a variant phosphopantetheinylation-site sequence., Johnson MA, Peti W, Herrmann T, Wilson IA, Wuthrich K, Protein Sci. 2006 May;15(5):1030-41. Epub 2006 Apr 5. PMID:16597827
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (2afe.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2AFE
  • Original NMR restraints for 2AFE from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 2AFE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AFE from S2C, [Save to disk]
    • View 2AFE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2AFE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2AFE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2afe] [2afe_A]
  • SWISS-PROT database: [Q8YWG3]
  • Domain organization of [Q8YWG3_ANASP] by SWISSPFAM
    • Other resources with information on 2AFE
  • Community annotation for 2AFE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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