2BBP Viral Protein date Oct 17, 2005
title Nmr Structures Of The Peptide Linked To The Genome (Vpg) Of
authors C.H.Schein, N.Oezguen
compound source
Molecule: Genome Linked Protein Vpg
Chain: A
Fragment: Residues 1-22
Engineered: Yes
 Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Human Poli Serotype 1.
methodSolution NMR
Primary referenceNMR structure of the viral peptide linked to the genome (VPg) of poliovirus., Schein CH, Oezguen N, Volk DE, Garimella R, Paul A, Braun W, Peptides. 2006 Mar 13;. PMID:16540201
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2bbp.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 2BBP
  • Original NMR restraints for 2BBP from PDB
  • Retrieve 2BBP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BBP from S2C, [Save to disk]
    • View 2BBP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2BBP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BBP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bbp_A] [2bbp]
  • SWISS-PROT database: [P03300]
  • Domain organization of [POLG_POL1M] by SWISSPFAM
    • Other resources with information on 2BBP
  • Community annotation for 2BBP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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