2BNG Hydrolase date Mar 24, 2005
title Structure Of An M.Tuberculosis Leh-Like Epoxide Hydrolase
authors P.Johansson, M.Arand, T.Unge, T.Bergfors, T.A.Jones, S.L.Mowbray
compound source
Molecule: Mb2760
Chain: A, B, C
Synonym: Leh-Like Epoxide Hydrolase
Ec: 3.3.2.8
Engineered: Yes
Other_details: Endogenous Ligand Of Unknown Origin Bound In The Active Site
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 83332
Strain: H37rv
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.222 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.901 81.901 117.025 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.5 Å
ligand CA, MSE enzyme Hydrolase E.C.3.3.2.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure of an atypical epoxide hydrolase from Mycobacterium tuberculosis gives insights into its function., Johansson P, Unge T, Cronin A, Arand M, Bergfors T, Jones TA, Mowbray SL, J Mol Biol. 2005 Sep 2;351(5):1048-56. PMID:16051262
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (2bng.pdb1.gz) 269 Kb
  • LPC: Ligand-Protein Contacts for 2BNG
  • CSU: Contacts of Structural Units for 2BNG
  • Likely Quarternary Molecular Structure file(s) for 2BNG
  • Structure Factors (214 Kb)
  • Retrieve 2BNG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BNG from S2C, [Save to disk]
  • Re-refined 2bng structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BNG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BNG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BNG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bng] [2bng_B] [2bng_C] [2bng_A]
  • SWISS-PROT database: [Q7TY00]
  • Domain organization of [Q7TY00_MYCBO] by SWISSPFAM
  • Other resources with information on 2BNG
  • Community annotation for 2BNG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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