2BO9 Hydrolase date Apr 08, 2005
title Human Carboxypeptidase A4 In Complex With Human Latexin.
authors I.Pallares, R.Bonet, R.Garcia-Castellanos, S.Ventura, F.X.Aviles J.Vendrell, F.X.Gomis-Rueth
compound source
Molecule: Carboxypeptidase A4
Chain: A, C
Fragment: Alphabeta-Hydrolase Domain, Residues 114-421
Synonym: Carboxypeptidase A3, Unq694pro1339
Engineered: Yes
Other_details: N-Glycosylation At Asn148 In Both Copies Pre
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_plasmid: Ppic9
Other_details: Cdna Provided By Drs.Huang And Smith, Mayo C Rochester, Mn.;

Molecule: Human Latexin
Chain: B, D
Synonym: Mum
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pgat2
symmetry Space Group: P 1 21 1
R_factor 0.149 R_Free 0.176
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.922 96.651 92.358 90.00 99.60 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand ACN, MPD, NAG, VAL, ZN enzyme
note 2BO9 is a representative structure and supersedes 2BK7
related structures by homologous chain: 1WNH
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B
  • metalloendopeptidase inhibit...


  • Primary referenceStructure of human carboxypeptidase A4 with its endogenous protein inhibitor, latexin., Pallares I, Bonet R, Garcia-Castellanos R, Ventura S, Aviles FX, Vendrell J, Gomis-Ruth FX, Proc Natl Acad Sci U S A. 2005 Mar 15;102(11):3978-83. Epub 2005 Feb 28. PMID:15738388
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (198 Kb) [Save to disk]
  • Biological Unit Coordinates (2bo9.pdb1.gz) 190 Kb
  • LPC: Ligand-Protein Contacts for 2BO9
  • CSU: Contacts of Structural Units for 2BO9
  • Likely Quarternary Molecular Structure file(s) for 2BO9
  • Retrieve 2BO9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BO9 from S2C, [Save to disk]
  • View 2BO9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BO9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BO9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bo9_A] [2bo9_D] [2bo9_C] [2bo9] [2bo9_B]
  • SWISS-PROT database: [Q9UI42] [Q9BS40]
  • Domain organization of [CBPA4_HUMAN] [LXN_HUMAN] by SWISSPFAM
  • Domain found in 2BO9: [Zn_pept ] by SMART
  • Other resources with information on 2BO9
  • Community annotation for 2BO9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science