2BRJ	Isomerase	date	May 06, 2005
title	X-Ray Structure Of The Allene Oxide Cyclase From Arabidopsis
authors	E.Hofmann, P.Zerbe, F.Schaller
compound		source
Molecule: Arabidopsis Thaliana Genomic Dna, Chromosome 3, Chain: A, B, C Synonym: Allene Oxide Cyclase, At3g25770k13n2_9 Ec: 5.3.99.6 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Mouse-Ear Cress Organism_taxid: 3702 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: M15 Expression_system_vector: Pqe-30
symmetry	Space Group: P 21 21 21	R_factor 0.173 R_Free 0.191
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.480 99.950 106.150 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	GOL, MSE	enzyme	Isomerase E.C.5.3.99.6 BRENDA
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	The crystal structure of Arabidopsis thaliana allene oxide cyclase: insights into the oxylipin cyclization reaction., Hofmann E, Zerbe P, Schaller F, Plant Cell. 2006 Nov;18(11):3201-17. Epub 2006 Nov 3. PMID:17085685

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk] Biological Unit Coordinates (2brj.pdb1.gz) 97 Kb LPC: Ligand-Protein Contacts for 2BRJ CSU: Contacts of Structural Units for 2BRJ Likely Quarternary Molecular Structure file(s) for 2BRJ Structure Factors (786 Kb) Retrieve 2BRJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BRJ from S2C, [Save to disk] Re-refined 2brj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BRJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BRJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BRJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2brj_C] [2brj] [2brj_B] [2brj_A] SWISS-PROT database: [Q9LS02] Domain organization of [AOC2_ARATH] by SWISSPFAM

Other resources with information on 2BRJ

Community annotation for 2BRJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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