2BYY Transferase date Aug 09, 2005
title E.Coli Kas I H298e Mutation
authors J.G.Olsen, P.Von Wettstein-Knowles, A.Henriksen
compound source
Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase I
Chain: A, B, C, D
Synonym: Beta-Ketoacyl-Acp Synthase I, Kas I
Ec: 2.3.1.41
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15(Prep4)
Expression_system_plasmid: Pqe30
symmetry Space Group: P 21 21 21
R_factor 0.217 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.130 139.386 213.092 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand NH4 enzyme Transferase E.C.2.3.1.41 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceFatty acid synthesis. Role of active site histidines and lysine in Cys-His-His-type beta-ketoacyl-acyl carrier protein synthases., von Wettstein-Knowles P, Olsen JG, McGuire KA, Henriksen A, FEBS J. 2006 Feb;273(4):695-710. PMID:16441657
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (249 Kb) [Save to disk]
  • Biological Unit Coordinates (2byy.pdb1.gz) 124 Kb
  • Biological Unit Coordinates (2byy.pdb2.gz) 124 Kb
  • LPC: Ligand-Protein Contacts for 2BYY
  • CSU: Contacts of Structural Units for 2BYY
  • Likely Quarternary Molecular Structure file(s) for 2BYY
  • Structure Factors (634 Kb)
  • Retrieve 2BYY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BYY from S2C, [Save to disk]
  • Re-refined 2byy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BYY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BYY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BYY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2byy_D] [2byy_B] [2byy_C] [2byy_A] [2byy]
  • SWISS-PROT database: [P0A953]
  • Domain organization of [FABB_ECOLI] by SWISSPFAM
  • Other resources with information on 2BYY
  • Community annotation for 2BYY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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