2C6Z Hydrolase date Nov 16, 2005
title Crystal Structure Of Dimethylarginine Dimethylaminohydrolase Complex With Citrulline
authors D.Frey, O.Braun, C.Briand, M.Vasak, M.G.Grutter
compound source
Molecule: Ng, Ng-Dimethylarginine Dimethylaminohydrolase 1
Chain: A
Synonym: Dimethylarginine Dimethylaminohydrolase I, Dimethylargininase 1, Ddahi, Ddah-1;
Ec: 3.5.3.18
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Brain
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.652 80.134 44.932 90.00 108.07 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand CIR, CIT BindingDB enzyme Hydrolase E.C.3.5.3.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the mammalian NOS regulator dimethylarginine dimethylaminohydrolase: A basis for the design of specific inhibitors., Frey D, Braun O, Briand C, Vasak M, Grutter MG, Structure. 2006 May;14(5):901-11. PMID:16698551
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (2c6z.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 2C6Z
  • CSU: Contacts of Structural Units for 2C6Z
  • Likely Quarternary Molecular Structure file(s) for 2C6Z
  • Structure Factors (627 Kb)
  • Retrieve 2C6Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C6Z from S2C, [Save to disk]
  • Re-refined 2c6z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C6Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C6Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C6Z, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c6z] [2c6z_A]
  • SWISS-PROT database: [P56965]
  • Domain organization of [DDAH1_BOVIN] by SWISSPFAM
  • Other resources with information on 2C6Z
  • Community annotation for 2C6Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science