2C9E Photosynthesis date Dec 09, 2005
title Peridinin-Chlorophyll A Protein, High-Salt Form
authors T.Schulte, F.P.Sharples, R.G.Hiller, E.Hofmann
compound source
Molecule: Peridinin-Chlorophyll A Protein
Chain: A
 Organism_scientific: Amphidinium Carterae
Organism_common: Dinoflagellate
Organism_taxid: 2961
symmetry Space Group: P 1 21 1
R_factor 0.174 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.576 62.673 63.345 90.00 100.89 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand CLA, DGD, MG, PID enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray Structure of the High-Salt Form of the Peridinin-Chlorophyll a-Protein from the Dinoflagellate Amphidinium carterae: Modulation of the Spectral Properties of Pigments by the Protein Environment., Schulte T, Sharples FP, Hiller RG, Hofmann E, Biochemistry. 2009 Apr 27. PMID:19371099
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2c9e.pdb1.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 2C9E
  • CSU: Contacts of Structural Units for 2C9E
  • Likely Quarternary Molecular Structure file(s) for 2C9E
  • Structure Factors (167 Kb)
  • Retrieve 2C9E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C9E from S2C, [Save to disk]
  • Re-refined 2c9e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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    • Visual 3D analysis of 2C9E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C9E, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c9e_A] [2c9e]
  • SWISS-PROT database: [O76183]
  • Domain organization of [O76183_AMPCA] by SWISSPFAM
    • Other resources with information on 2C9E
  • Community annotation for 2C9E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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