2CQX Structural Genomics, Unknown Function date May 20, 2005
title Solution Structure Of Rsgi Ruh-034, A Homeodomain From Mouse
authors A.Z.M.Ruhul Momen, H.Onuki, H.Hirota, T.Tomizawa, S.Koshiba, T.Ki S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Lag1 Longevity Assurance Homolog 5
Chain: A
Fragment: Residues 8-66
Synonym: Translocating Chain-Associating Membrane Protein H Tram Homolog 4, Homeodomain;
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040727-13
Other_details: Cell-Free Protein Synthesis (E. Coli)
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (379 Kb) [Save to disk]
  • Biological Unit Coordinates (2cqx.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2CQX
  • Original NMR restraints for 2CQX from PDB
  • Retrieve 2CQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CQX from S2C, [Save to disk]
    • View 2CQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CQX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CQX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cqx] [2cqx_A]
  • SWISS-PROT database: [Q9D6K9]
  • Domain organization of [LASS5_MOUSE] by SWISSPFAM
  • Domain found in 2CQX: [HOX ] by SMART
    • Other resources with information on 2CQX
  • Community annotation for 2CQX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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