2DE7	Oxidoreductase	date	Feb 08, 2006
title	The Substrate-Bound Complex Between Oxygenase And Ferredoxin Carbazole 1,9a-Dioxygenase
authors	Y.Ashikawa, H.Nojiri
compound		source
Molecule: Terminal Oxygenase Component Of Carbazole Chain: A, B, C Synonym: Terminal Oxygenase Component Of Carbazole 1,9a-Dio Ec: 1.14.12.- Engineered: Yes		Organism_scientific: Janthinobacterium Organism_taxid: 29580 Strain: J3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pej3aac
Molecule: Ferredoxin Component Of Carbazole Chain: D, E, F Synonym: Ferredoxin Component Of Carbazole 1,9a-Dioxygenase Ec: 1.14.12.- Engineered: Yes		Organism_scientific: Pseudomonas Resinovorans Organism_taxid: 53412 Strain: Ca10 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pecac1
symmetry	Space Group: P 1 21 1	R_factor 0.207 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 97.862 89.403 104.665 90.00 104.18 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	9CA, FE2, FES	enzyme	Oxidoreductase E.C.1.14.12 BRENDA
Gene Ontology	Chain Function Process Component A, C, B F, D, E
Primary reference	Electron transfer complex formation between oxygenase and ferredoxin components in rieske nonheme iron oxygenase system., Ashikawa Y, Fujimoto Z, Noguchi H, Habe H, Omori T, Yamane H, Nojiri H, Structure. 2006 Dec;14(12):1779-89. PMID:17161368

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (257 Kb) [Save to disk] Biological Unit Coordinates (2de7.pdb1.gz) 251 Kb LPC: Ligand-Protein Contacts for 2DE7 CSU: Contacts of Structural Units for 2DE7 Likely Quarternary Molecular Structure file(s) for 2DE7 Structure Factors (971 Kb) Retrieve 2DE7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DE7 from S2C, [Save to disk] Re-refined 2de7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DE7 in 3D

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Visual 3D analysis of 2DE7

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2DE7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2de7_E] [2de7_F] [2de7_B] [2de7_C] [2de7_A] [2de7] [2de7_D] SWISS-PROT database: [Q84II6] [Q8GI16] Domain organization of [Q84II6_9BURK] [Q8GI16_PSERE] by SWISSPFAM

Other resources with information on 2DE7

Community annotation for 2DE7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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