2DQ7	Transferase	date	May 23, 2006
title	Crystal Structure Of Fyn Kinase Domain Complexed With Stauro
authors	T.Kinoshita, T.Tada
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Fyn Chain: X Fragment: Fyn, Protein Kinase Synonym: Proto-Oncogene Syn, Proto-Oncogene C-Fyn, Src-Like Slk, P59-Fyn; Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac1
symmetry	Space Group: P 32 2 1	R_factor 0.255 R_Free 0.281
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.962 52.962 210.989 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	PTR, STU BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component X
Primary reference	Structure of human Fyn kinase domain complexed with staurosporine., Kinoshita T, Matsubara M, Ishiguro H, Okita K, Tada T, Biochem Biophys Res Commun. 2006 Aug 4;346(3):840-4. Epub 2006 Jun 13. PMID:16782058

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2dq7.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 2DQ7 CSU: Contacts of Structural Units for 2DQ7 Likely Quarternary Molecular Structure file(s) for 2DQ7 Structure Factors (66 Kb) Retrieve 2DQ7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DQ7 from S2C, [Save to disk] Re-refined 2dq7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DQ7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2DQ7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2DQ7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2dq7_X] [2dq7] SWISS-PROT database: [P06241] Domain organization of [FYN_HUMAN] by SWISSPFAM Domain found in 2DQ7: [TyrKc ] by SMART

Other resources with information on 2DQ7

Community annotation for 2DQ7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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