2DWB Transferase date Aug 10, 2006
title Aurora-A Kinase Complexed With Amppnp
authors M.Kukimoto-Niino, K.Murayama, S.Shirouzu, S.Yokoyama, Riken Stru Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Kinase Domain
Synonym: Aurora-A Kinase, Serinethreonine Kinase 15, Auror Related Kinase 1, Aurora-Related Kinase 1, Hark1, Aurora-A, Tumor-Amplified Kinase;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pe060808-03
Other_details: Cell Free Protein Synthesis
symmetry Space Group: P 61 2 2
R_factor 0.227 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.473 81.473 174.183 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand ANP, MSE, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2dwb.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2DWB
  • CSU: Contacts of Structural Units for 2DWB
  • Likely Quarternary Molecular Structure file(s) for 2DWB
  • Structure Factors (99 Kb)
  • Retrieve 2DWB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DWB from S2C, [Save to disk]
  • Re-refined 2dwb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DWB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DWB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DWB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dwb_A] [2dwb]
  • SWISS-PROT database: [O14965]
  • Domain organization of [STK6_HUMAN] by SWISSPFAM
  • Domain found in 2DWB: [S_TKc ] by SMART
  • Other resources with information on 2DWB
  • Community annotation for 2DWB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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